Sequence Similarity Clusters for the Entities in PDB 1CA8

Entity #1 | Chains: A
Thrombin light chain protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 163 328 43
95 % 163 329 58
90 % 163 329 63
70 % 163 331 74
50 % 163 331 100
40 % 163 331 124
30 % 163 331 135
Entity #2 | Chains: B
Thrombin heavy chain protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 142 283 53
95 % 179 367 35
90 % 180 374 36
70 % 180 398 41
50 % 180 398 75
40 % 953 1617 4
30 % 1025 1759 6
Entity #3 | Chains: C
HIRUGEN protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.