Sequence Similarity Clusters for the Entities in PDB 1CA4

Entity #1 | Chains: A,B,C,D,E,F
PROTEIN (TNF RECEPTOR ASSOCIATED FACTOR 2) protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 2558
95 % 6 10 1092 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.5
PDBFlex
90 % 6 10 1114
70 % 6 10 1151
50 % 7 19 917
40 % 8 23 746
30 % 9 27 678

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures