Sequence Similarity Clusters for the Entities in PDB 1CA4

Entity #1 | Chains: A,B,C,D,E,F
PROTEIN (TNF RECEPTOR ASSOCIATED FACTOR 2) protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 2498
95 % 6 10 1072 Flexibility: No
Max RMSD: 2.1, Avg RMSD: 0.5
PDBFlex
90 % 6 10 1094
70 % 6 10 1132
50 % 7 19 907
40 % 8 23 733
30 % 9 27 671

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.