Sequence Similarity Clusters for the Entities in PDB 1CA0

Entity #1 | Chains: A,F
BOVINE CHYMOTRYPSIN protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B,G
BOVINE CHYMOTRYPSIN protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 38 760
95 % 29 38 1048
90 % 29 38 1067
70 % 29 40 1066
50 % 29 40 1109
40 % 31 42 1087
30 % 35 50 927
Entity #3 | Chains: C,H
BOVINE CHYMOTRYPSIN protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 38 761
95 % 29 38 1050
90 % 29 38 1069
70 % 29 40 1072
50 % 32 43 1043
40 % 36 52 914
30 % 36 52 899
Entity #4 | Chains: D,I
PROTEASE INHIBITOR DOMAIN OF ALZHEIMER'S AMYLOID BETA-PROTEIN PRECURSOR protein, length: 54 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 5397
95 % 3 7 4188
90 % 3 7 4210
70 % 3 7 4137
50 % 6 13 2512
40 % 101 157 175
30 % 101 157 190

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.