Sequence Similarity Clusters for the Entities in PDB 1C9T

Entity #1 | Chains: A,B,C,D,E,F
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 381 389 34
95 % 439 448 33 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 439 448 34
70 % 523 532 19
50 % 672 683 14
40 % 1656 1696 4
30 % 1796 1846 6
Entity #2 | Chains: G,H,I,J,K,L
BDELLASTASIN protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 9929
95 % 3 3 10001 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.0
PDBFlex
90 % 3 3 9877
70 % 3 3 9382
50 % 3 3 8491
40 % 3 3 7782
30 % 3 3 6869

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.