Sequence Similarity Clusters for the Entities in PDB 1C9T

Entity #1 | Chains: A,B,C,D,E,F
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 400 412 39
95 % 458 471 18 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 458 471 20
70 % 544 557 19
50 % 693 708 14
40 % 1815 1864 4
30 % 1832 1886 6
Entity #2 | Chains: G,H,I,J,K,L
BDELLASTASIN protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 10349
95 % 3 3 10361 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.0
PDBFlex
90 % 3 3 10231
70 % 3 3 9707
50 % 3 3 8778
40 % 3 3 8041
30 % 3 3 7089

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures