Sequence Similarity Clusters for the Entities in PDB 1C9T

Entity #1 | Chains: A,B,C,D,E,F
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 375 383 40
95 % 433 442 30 Flexibility: No
Max RMSD: 2.7, Avg RMSD: 0.4
PDBFlex
90 % 433 442 32
70 % 517 526 19
50 % 666 677 13
40 % 1640 1679 4
30 % 1778 1827 6
Entity #2 | Chains: G,H,I,J,K,L
BDELLASTASIN protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 9626
95 % 3 3 9683 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 3 3 9571
70 % 3 3 9091
50 % 3 3 8226
40 % 3 3 7543
30 % 3 3 6658

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.