Sequence Similarity Clusters for the Entities in PDB 1C9S

Entity #1 | Chains: W
SINGLE STRANDED RNA (55-MER) rna, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V
TRP RNA-BINDING ATTENUATION PROTEIN protein, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 22 36
95 % 7 23 43 Flexibility: No
Max RMSD: 3.6, Avg RMSD: 0.3
PDBFlex
90 % 7 23 49
70 % 11 29 42
50 % 11 29 76
40 % 11 29 94
30 % 11 29 108

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.