Sequence Similarity Clusters for the Entities in PDB 1C9P

Entity #1 | Chains: A
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41387
95 % 33 33 1284 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 33 33 1311
70 % 539 557 19
50 % 673 708 14
40 % 1704 1863 4
30 % 1717 1885 6
Entity #2 | Chains: B
BDELLASTASIN protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 10331
95 % 2 3 10344 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.0
PDBFlex
90 % 2 3 10214
70 % 2 3 9693
50 % 2 3 8769
40 % 2 3 8032
30 % 2 3 7083

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures