Sequence Similarity Clusters for the Entities in PDB 1C9L

Entity #1 | Chains: A,B
CLATHRIN protein, length: 357 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 13 2185
95 % 11 13 2827 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 11 13 2873
70 % 11 13 2845
50 % 11 13 2819
40 % 11 13 2774
30 % 11 13 2587
Entity #2 | Chains: C,D
B-ADAPTIN 3 protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.