Sequence Similarity Clusters for the Entities in PDB 1C8V

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE; ALPHA CHAIN protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 41 48 770
95 % 53 61 803 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.6
PDBFlex
90 % 53 61 839
70 % 55 65 760
50 % 56 68 678
40 % 66 93 321
30 % 66 95 326
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE; BETA CHAIN protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 16 3165
95 % 53 63 776
90 % 53 63 803
70 % 53 64 827
50 % 64 85 324
40 % 64 85 345
30 % 65 86 344

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.