Sequence Similarity Clusters for the Entities in PDB 1C8V

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE; ALPHA CHAIN protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 50 57 769
95 % 53 61 858 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.5
PDBFlex
90 % 53 61 891
70 % 55 65 787
50 % 56 68 712
40 % 65 82 485
30 % 273 332 82
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE; BETA CHAIN protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 24 30 1675
95 % 53 63 821 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.7
PDBFlex
90 % 53 63 848
70 % 53 64 872
50 % 71 92 298
40 % 71 92 330
30 % 73 94 327

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures