Sequence Similarity Clusters for the Entities in PDB 1C8S

Entity #1 | Chains: A
BACTERIORHODOPSIN ("M" STATE INTERMEDIATE) protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63807
95 % 1 1 44459
90 % 33 121 273
70 % 33 121 310
50 % 35 136 269
40 % 35 136 283
30 % 48 194 180

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures