Sequence Similarity Clusters for the Entities in PDB 1C8D

Entity #1 | Chains: A
CANINE PARVOVIRUS CAPSID protein, length: 584 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 24971
95 % 2 13 1206 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 2 13 1233
70 % 2 13 1268
50 % 2 19 1161
40 % 2 19 1173
30 % 2 19 1152

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.