Sequence Similarity Clusters for the Entities in PDB 1C7C

Entity #1 | Chains: A
PROTEIN (DEOXYHEMOGLOBIN (ALPHA CHAIN)) protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 16622
95 % 1 9 8423 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.5
PDBFlex
90 % 1 9 8350
70 % 1 9 8060
50 % 1 9 7395
40 % 1 9 6832
30 % 1 9 6096
Entity #2 | Chains: B,D
PROTEIN (DEOXYHEMOGLOBIN (BETA CHAIN)) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 42 217 43
95 % 46 253 20 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 47 258 20
70 % 58 349 14
50 % 139 759 4
40 % 140 764 7
30 % 434 1315 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures