Sequence Similarity Clusters for the Entities in PDB 1C7C

Entity #1 | Chains: A
PROTEIN (DEOXYHEMOGLOBIN (ALPHA CHAIN)) protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 16166
95 % 1 9 8224 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.5
PDBFlex
90 % 1 9 8156
70 % 1 9 7862
50 % 1 9 7214
40 % 1 9 6666
30 % 1 9 5954
Entity #2 | Chains: B,D
PROTEIN (DEOXYHEMOGLOBIN (BETA CHAIN)) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 42 215 41
95 % 46 251 19 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 47 256 21
70 % 58 347 14
50 % 139 755 4
40 % 140 760 7
30 % 427 1299 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures