Sequence Similarity Clusters for the Entities in PDB 1C7C

Entity #1 | Chains: A
PROTEIN (DEOXYHEMOGLOBIN (ALPHA CHAIN)) protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 20160
95 % 1 9 7847 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 1 9 7791
70 % 1 9 7573
50 % 1 9 6978
40 % 1 9 6485
30 % 1 9 5799
Entity #2 | Chains: B,D
PROTEIN (DEOXYHEMOGLOBIN (BETA CHAIN)) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 6795
95 % 46 250 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 47 255 19
70 % 58 346 12
50 % 139 754 4
40 % 140 759 8
30 % 404 1218 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures