Sequence Similarity Clusters for the Entities in PDB 1C5Y

Entity #1 | Chains: A
PROTEIN (UROKINASE-TYPE PLASMINOGEN ACTIVATOR) protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 20 2187
95 % 5 20 2835
90 % 5 20 2877
70 % 5 20 2847
50 % 5 20 2808
40 % 5 20 2763
30 % 5 20 2586
Entity #2 | Chains: B
PROTEIN (UROKINASE-TYPE PLASMINOGEN ACTIVATOR) protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 15 3561
95 % 24 112 304
90 % 24 112 320
70 % 24 117 340
50 % 24 117 399
40 % 24 128 364
30 % 575 1833 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.