Sequence Similarity Clusters for the Entities in PDB 1C5M

Entity #1 | Chains: D
PROTEIN (COAGULATION FACTOR X) protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 43 119 226
95 % 55 134 263 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 55 134 277
70 % 55 135 320
50 % 544 708 14
40 % 1219 1863 4
30 % 1227 1885 6
Entity #2 | Chains: F
PROTEIN (COAGULATION FACTOR X) protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 25 1380
95 % 2 26 1765
90 % 2 26 1805
70 % 2 26 1816
50 % 2 26 1852
40 % 2 31 1522
30 % 2 31 1501

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures