Sequence Similarity Clusters for the Entities in PDB 1C5M

Entity #1 | Chains: D
PROTEIN (COAGULATION FACTOR X) protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 43 119 207
95 % 55 134 242 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 55 134 255
70 % 55 135 283
50 % 519 677 13
40 % 1099 1669 4
30 % 1185 1811 6
Entity #2 | Chains: F
PROTEIN (COAGULATION FACTOR X) protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 25 1246
95 % 2 26 1584 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 1.1
PDBFlex
90 % 2 26 1619
70 % 2 26 1655
50 % 2 26 1702
40 % 2 31 1439
30 % 2 31 1411

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.