Sequence Similarity Clusters for the Entities in PDB 1C5M

Entity #1 | Chains: D
PROTEIN (COAGULATION FACTOR X) protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 55 136 215
95 % 55 136 276 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 55 136 288
70 % 55 137 332
50 % 544 712 15
40 % 1232 1898 4
30 % 1239 1912 7
Entity #2 | Chains: F
PROTEIN (COAGULATION FACTOR X) protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 26 1569
95 % 2 26 1840 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 1.1
PDBFlex
90 % 2 26 1883
70 % 2 26 1899
50 % 2 26 1943
40 % 2 31 1595
30 % 2 31 1574

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures