Sequence Similarity Clusters for the Entities in PDB 1C5M

Entity #1 | Chains: D
PROTEIN (COAGULATION FACTOR X) protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 55 136 222
95 % 55 136 282 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 55 136 294
70 % 55 137 338
50 % 546 714 16
40 % 1245 1912 4
30 % 1252 1926 7
Entity #2 | Chains: F
PROTEIN (COAGULATION FACTOR X) protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 26 1615
95 % 2 26 1889 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 1.1
PDBFlex
90 % 2 26 1937
70 % 2 26 1959
50 % 2 26 1986
40 % 2 31 1631
30 % 2 31 1604

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures