Sequence Similarity Clusters for the Entities in PDB 1C5C

Entity #1 | Chains: L
CHIMERIC DECARBOXYLASE ANTIBODY 21D8 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41048
95 % 1 9 7840 Flexibility: Low
Max RMSD: 6.1, Avg RMSD: 3.0
PDBFlex
90 % 28 729 3
70 % 105 2362 1
50 % 221 4781 1
40 % 221 4781 1
30 % 238 5635 1
Entity #2 | Chains: H
CHIMERIC DECARBOXYLASE ANTIBODY 21D8 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40951
95 % 1 2 31266 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 2 29990
70 % 108 2311 2
50 % 222 4781 1
40 % 222 4781 1
30 % 239 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures