Sequence Similarity Clusters for the Entities in PDB 1C5C

Entity #1 | Chains: L
CHIMERIC DECARBOXYLASE ANTIBODY 21D8 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39954
95 % 1 9 7630 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 2.7
PDBFlex
90 % 25 693 3
70 % 99 2264 1
50 % 208 4587 1
40 % 208 4587 1
30 % 225 5394 1
Entity #2 | Chains: H
CHIMERIC DECARBOXYLASE ANTIBODY 21D8 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39862
95 % 1 2 30423 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 2 29208
70 % 102 2222 2
50 % 209 4587 1
40 % 209 4587 1
30 % 226 5394 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.