Sequence Similarity Clusters for the Entities in PDB 1C5C

Entity #1 | Chains: L
CHIMERIC DECARBOXYLASE ANTIBODY 21D8 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 33724
95 % 1 2 28988 Flexibility: Low
Max RMSD: 6.1, Avg RMSD: 3.0
PDBFlex
90 % 32 762 2
70 % 114 2519 1
50 % 240 5107 1
40 % 314 5756 1
30 % 387 7175 1
Entity #2 | Chains: H
CHIMERIC DECARBOXYLASE ANTIBODY 21D8 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41348
95 % 1 2 34774 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 8 6773
70 % 117 2478 2
50 % 241 5107 1
40 % 315 5756 1
30 % 388 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures