Sequence Similarity Clusters for the Entities in PDB 1C4Z

Entity #1 | Chains: A,B,C
UBIQUITIN-PROTEIN LIGASE E3A protein, length: 358 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 11572
95 % 1 2 11349 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 1 2 11199
70 % 1 2 10577
50 % 1 2 9534
40 % 1 2 8692
30 % 15 22 1623
Entity #2 | Chains: D
UBIQUITIN CONJUGATING ENZYME E2 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 9192
95 % 3 8 5813 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.2
PDBFlex
90 % 3 8 5809
70 % 3 8 5685
50 % 5 11 3917
40 % 130 174 169
30 % 134 182 177

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.