Sequence Similarity Clusters for the Entities in PDB 1C4Z

Entity #1 | Chains: A,B,C
UBIQUITIN-PROTEIN LIGASE E3A protein, length: 358 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12331
95 % 1 2 12046 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 1 2 11881
70 % 1 2 11227
50 % 1 2 10102
40 % 1 2 9200
30 % 15 22 1717
Entity #2 | Chains: D
UBIQUITIN CONJUGATING ENZYME E2 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 9790
95 % 3 9 5369
90 % 3 9 5395
70 % 3 9 5291
50 % 5 12 3811
40 % 133 181 172
30 % 138 191 172

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures