Sequence Similarity Clusters for the Entities in PDB 1C4Z

Entity #1 | Chains: A,B,C
UBIQUITIN-PROTEIN LIGASE E3A protein, length: 358 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 11755
95 % 1 2 11532 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 1 2 11383
70 % 1 2 10776
50 % 1 2 9700
40 % 1 2 8844
30 % 15 22 1642
Entity #2 | Chains: D
UBIQUITIN CONJUGATING ENZYME E2 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 9307
95 % 3 9 5114 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.2
PDBFlex
90 % 3 9 5134
70 % 3 9 5050
50 % 5 12 3653
40 % 131 176 166
30 % 135 184 176

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.