Sequence Similarity Clusters for the Entities in PDB 1C4Z

Entity #1 | Chains: A,B,C
UBIQUITIN-PROTEIN LIGASE E3A protein, length: 358 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 11924
95 % 1 2 11676 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 1 2 11514
70 % 1 2 10889
50 % 1 2 9807
40 % 1 2 8940
30 % 15 22 1663
Entity #2 | Chains: D
UBIQUITIN CONJUGATING ENZYME E2 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 9438
95 % 3 9 5194
90 % 3 9 5214
70 % 3 9 5119
50 % 5 12 3693
40 % 132 180 164
30 % 136 188 169

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures