Sequence Similarity Clusters for the Entities in PDB 1C40

Entity #1 | Chains: A
PROTEIN (HEMOGLOBIN (ALPHA CHAIN)) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64763
95 % 3 5 7836
90 % 3 11 2846
70 % 219 324 16
50 % 518 738 4
40 % 523 743 7
30 % 945 1186 8
Entity #2 | Chains: B
PROTEIN (HEMOGLOBIN (BETA CHAIN)) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 13330
95 % 4 12 2312
90 % 6 17 1635
70 % 235 338 13
50 % 519 738 4
40 % 524 743 7
30 % 946 1186 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.