Sequence Similarity Clusters for the Entities in PDB 1C40

Entity #1 | Chains: A
PROTEIN (HEMOGLOBIN (ALPHA CHAIN)) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62905
95 % 3 5 7556
90 % 3 11 2765
70 % 218 321 17
50 % 514 730 4
40 % 519 735 8
30 % 938 1175 8
Entity #2 | Chains: B
PROTEIN (HEMOGLOBIN (BETA CHAIN)) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 12900
95 % 4 12 2232
90 % 6 17 1566
70 % 234 335 14
50 % 515 730 4
40 % 520 735 8
30 % 939 1175 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.