Sequence Similarity Clusters for the Entities in PDB 1C3S

Entity #1 | Chains: A
HDLP (HISTONE DEACETYLASE-LIKE PROTEIN) protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 26843
95 % 3 3 17081 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 3 3 16747
70 % 3 3 15607
50 % 3 3 13704
40 % 3 3 12331
30 % 3 3 10672

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures