Sequence Similarity Clusters for the Entities in PDB 1C3S

Entity #1 | Chains: A
HDLP (HISTONE DEACETYLASE-LIKE PROTEIN) protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 26487
95 % 3 3 16853 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 3 3 16528
70 % 3 3 15415
50 % 3 3 13537
40 % 3 3 12185
30 % 3 3 10547

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures