Sequence Similarity Clusters for the Entities in PDB 1C3A

Entity #1 | Chains: A
FLAVOCETIN-A: ALPHA SUBUNIT protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 69098
95 % 1 2 23071 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 2 22315
70 % 1 2 20324
50 % 19 39 547
40 % 42 85 247
30 % 219 318 41
Entity #2 | Chains: B
FLAVOCETIN-A: BETA SUBUNIT protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52870
95 % 1 1 43659
90 % 1 2 19716
70 % 1 2 18054
50 % 17 35 601
40 % 43 85 247
30 % 220 318 41

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures