Sequence Similarity Clusters for the Entities in PDB 1C3A

Entity #1 | Chains: A
FLAVOCETIN-A: ALPHA SUBUNIT protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66443
95 % 1 2 19930 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 2 19387
70 % 1 2 17873
50 % 18 28 1275
40 % 38 60 629
30 % 148 220 101
Entity #2 | Chains: B
FLAVOCETIN-A: BETA SUBUNIT protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67504
95 % 1 1 46478
90 % 1 2 19570
70 % 1 2 18024
50 % 17 25 1510
40 % 39 60 629
30 % 149 220 101

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures