Sequence Similarity Clusters for the Entities in PDB 1C3A

Entity #1 | Chains: A
FLAVOCETIN-A: ALPHA SUBUNIT protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 67438
95 % 1 2 20262 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 2 19699
70 % 1 2 18148
50 % 18 28 1297
40 % 38 60 638
30 % 148 220 104
Entity #2 | Chains: B
FLAVOCETIN-A: BETA SUBUNIT protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68505
95 % 1 1 47096
90 % 1 2 19883
70 % 1 2 18300
50 % 17 25 1535
40 % 39 60 638
30 % 149 220 104

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures