Sequence Similarity Clusters for the Entities in PDB 1C39

Entity #1 | Chains: A,B
CATION-DEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 2896
95 % 6 11 2561 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.6
PDBFlex
90 % 6 11 2612
70 % 6 11 2603
50 % 6 11 2570
40 % 6 11 2522
30 % 6 11 2394

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.