Sequence Similarity Clusters for the Entities in PDB 1C39

Entity #1 | Chains: A,B
CATION-DEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 2947
95 % 6 11 2596 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.6
PDBFlex
90 % 6 11 2652
70 % 6 11 2644
50 % 6 11 2612
40 % 6 11 2562
30 % 6 11 2421

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures