Sequence Similarity Clusters for the Entities in PDB 1C39

Entity #1 | Chains: A,B
CATION-DEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 3217
95 % 6 11 2510 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.6
PDBFlex
90 % 6 11 2580
70 % 6 11 2568
50 % 6 11 2693
40 % 6 11 2619
30 % 6 11 2446

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures