Sequence Similarity Clusters for the Entities in PDB 1C30

Entity #1 | Chains: A,C,E,G
CARBAMOYL PHOSPHATE SYNTHETASE: LARGE SUBUNIT protein, length: 1073 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 1538
95 % 3 10 1331 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.3
PDBFlex
90 % 3 10 1355
70 % 3 10 1375
50 % 3 10 1425
40 % 3 10 1434
30 % 3 10 1412
Entity #2 | Chains: B,D,F,H
CARBAMOYL PHOSPHATE SYNTHETASE: SMALL SUBUNIT protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 8359
95 % 3 10 1351 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 3 10 1374
70 % 3 10 1389
50 % 3 10 1442
40 % 3 10 1454
30 % 3 10 1426

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures