Sequence Similarity Clusters for the Entities in PDB 1C30

Entity #1 | Chains: A,C,E,G
CARBAMOYL PHOSPHATE SYNTHETASE: LARGE SUBUNIT protein, length: 1073 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 1462
95 % 3 10 1273 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 3 10 1300
70 % 3 10 1320
50 % 3 10 1368
40 % 3 10 1381
30 % 3 10 1362
Entity #2 | Chains: B,D,F,H
CARBAMOYL PHOSPHATE SYNTHETASE: SMALL SUBUNIT protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 7976
95 % 3 10 1292 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 3 10 1318
70 % 3 10 1334
50 % 3 10 1385
40 % 3 10 1402
30 % 3 10 1376

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.