Sequence Similarity Clusters for the Entities in PDB 1C29

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 42 48 748
95 % 55 61 786 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.5
PDBFlex
90 % 55 61 816
70 % 57 65 723
50 % 58 68 645
40 % 73 92 343
30 % 74 94 339
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 16 3051
95 % 55 63 754
90 % 55 63 780
70 % 55 64 810
50 % 71 84 341
40 % 71 84 366
30 % 72 85 362

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.