Sequence Similarity Clusters for the Entities in PDB 1C29

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 51 57 737
95 % 55 61 829 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.5
PDBFlex
90 % 55 61 861
70 % 57 65 767
50 % 58 68 692
40 % 70 82 468
30 % 143 171 188
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 30 1605
95 % 55 63 802 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.7
PDBFlex
90 % 55 63 828
70 % 55 64 847
50 % 71 85 359
40 % 71 85 388
30 % 73 87 377

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures