Sequence Similarity Clusters for the Entities in PDB 1C1Y

Entity #1 | Chains: A
RAS-RELATED PROTEIN RAP-1A protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63599
95 % 10 21 1809 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 2.0
PDBFlex
90 % 10 21 1845
70 % 10 21 1874
50 % 162 272 103
40 % 237 462 21
30 % 340 797 16
Entity #2 | Chains: B
PROTO-ONCOGENE SERINE/THREONINE PROTEIN KINASE RAF-1 protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 16154
95 % 2 7 10900 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 2 7 10754
70 % 2 7 10207
50 % 2 8 8474
40 % 2 8 7764
30 % 2 8 6846

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures