Sequence Similarity Clusters for the Entities in PDB 1C1Y

Entity #1 | Chains: A
RAS-RELATED PROTEIN RAP-1A protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 65320
95 % 10 21 1893 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 2.0
PDBFlex
90 % 10 21 1936
70 % 10 21 1955
50 % 172 289 97
40 % 248 483 21
30 % 351 822 16
Entity #2 | Chains: B
PROTO-ONCOGENE SERINE/THREONINE PROTEIN KINASE RAF-1 protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 16722
95 % 2 7 11250 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 2 7 11106
70 % 2 7 10530
50 % 2 8 8722
40 % 2 8 7987
30 % 2 8 7036

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures