Sequence Similarity Clusters for the Entities in PDB 1C1Y

Entity #1 | Chains: A
RAS-RELATED PROTEIN RAP-1A protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61873
95 % 10 19 2776 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.8
PDBFlex
90 % 10 19 2819
70 % 10 19 2786
50 % 150 250 122
40 % 223 436 28
30 % 323 768 16
Entity #2 | Chains: B
PROTO-ONCOGENE SERINE/THREONINE PROTEIN KINASE RAF-1 protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 15678
95 % 2 7 10599 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 2 7 10464
70 % 2 7 9914
50 % 2 8 8254
40 % 2 8 7566
30 % 2 8 6674

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.