Sequence Similarity Clusters for the Entities in PDB 1C1Y

Entity #1 | Chains: A
RAS-RELATED PROTEIN RAP-1A protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 64573
95 % 10 21 1844 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 2.0
PDBFlex
90 % 10 21 1884
70 % 10 21 1919
50 % 170 287 97
40 % 245 478 21
30 % 348 817 16
Entity #2 | Chains: B
PROTO-ONCOGENE SERINE/THREONINE PROTEIN KINASE RAF-1 protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 16470
95 % 2 7 11082 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 2 7 10939
70 % 2 7 10378
50 % 2 8 8604
40 % 2 8 7886
30 % 2 8 6949

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures