Sequence Similarity Clusters for the Entities in PDB 1C1V

Entity #1 | Chains: L
Thrombin light chain protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 191 335 45
95 % 191 336 60
90 % 191 336 65
70 % 191 338 76
50 % 191 338 101
40 % 191 338 125
30 % 191 338 137
Entity #2 | Chains: H
Thrombin heavy chain protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 170 290 55
95 % 209 374 35
90 % 211 381 38
70 % 211 405 43
50 % 211 405 78
40 % 1080 1683 4
30 % 1160 1832 6
Entity #3 | Chains: I
Hirudin-2 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.