Sequence Similarity Clusters for the Entities in PDB 1C1V

Entity #1 | Chains: L
Thrombin light chain protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 185 328 42
95 % 185 329 57
90 % 185 329 61
70 % 185 331 71
50 % 185 331 95
40 % 185 331 120
30 % 185 331 132
Entity #2 | Chains: H
Thrombin heavy chain protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 164 283 51
95 % 203 367 33
90 % 205 374 35
70 % 205 398 40
50 % 205 398 70
40 % 1018 1605 4
30 % 1098 1747 6
Entity #3 | Chains: I
Hirudin-2 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.