Sequence Similarity Clusters for the Entities in PDB 1C1U

Entity #1 | Chains: L
ALPHA THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 113 328 43
95 % 113 329 58
90 % 113 329 63
70 % 113 331 72
50 % 113 331 96
40 % 113 331 120
30 % 113 331 133
Entity #2 | Chains: H
ALPHA THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 283 52
95 % 117 367 34
90 % 117 374 36
70 % 117 398 40
50 % 117 398 74
40 % 715 1606 4
30 % 759 1748 6
Entity #3 | Chains: I
ACETYL HIRUDIN protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.