Sequence Similarity Clusters for the Entities in PDB 1C1J

Entity #1 | Chains: A,B,C,D
BASIC PHOSPHOLIPASE A2 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23457
95 % 4 4 4898 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 4 4 4913
70 % 4 4 4798
50 % 160 170 147
40 % 275 296 101
30 % 275 296 112

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.