Sequence Similarity Clusters for the Entities in PDB 1C1E

Entity #1 | Chains: L
CATALYTIC ANTIBODY 1E9 (LIGHT CHAIN) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59982
95 % 54 145 147 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 58 155 150
70 % 638 2287 1
50 % 1308 4633 1
40 % 1308 4633 1
30 % 1462 5461 1
Entity #2 | Chains: H
CATALYTIC ANTIBODY 1E9 (HEAVY CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59651
95 % 1 1 41909
90 % 1 1 39960
70 % 631 2244 2
50 % 1309 4633 1
40 % 1309 4633 1
30 % 1463 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.