Sequence Similarity Clusters for the Entities in PDB 1C1E

Entity #1 | Chains: L
CATALYTIC ANTIBODY 1E9 (LIGHT CHAIN) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58350
95 % 53 143 147 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 57 153 149
70 % 508 1822 2
50 % 1278 4489 1
40 % 1278 4489 1
30 % 1425 5290 1
Entity #2 | Chains: H
CATALYTIC ANTIBODY 1E9 (HEAVY CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58027
95 % 1 1 40743
90 % 1 1 38888
70 % 616 2172 1
50 % 1279 4489 1
40 % 1279 4489 1
30 % 1426 5290 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.