Sequence Similarity Clusters for the Entities in PDB 1C1C

Entity #1 | Chains: A
HIV-1 REVERSE TRANSCRIPTASE (A-CHAIN) protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 61 458
95 % 65 230 106
90 % 65 230 110
70 % 65 230 125
50 % 66 231 154
40 % 66 231 170
30 % 66 231 187
Entity #2 | Chains: B
HIV-1 REVERSE TRANSCRIPTASE (B-CHAIN) protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 57 575
95 % 62 224 115
90 % 62 224 120
70 % 62 224 137
50 % 63 225 164
40 % 63 225 179
30 % 63 225 196

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.