Sequence Similarity Clusters for the Entities in PDB 1C1C

Entity #1 | Chains: A
HIV-1 REVERSE TRANSCRIPTASE (A-CHAIN) protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 61 375
95 % 65 228 104
90 % 65 228 108
70 % 65 228 122
50 % 66 229 149
40 % 66 229 166
30 % 66 229 183
Entity #2 | Chains: B
HIV-1 REVERSE TRANSCRIPTASE (B-CHAIN) protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 57 523
95 % 62 222 111
90 % 62 222 116
70 % 62 222 133
50 % 63 223 159
40 % 63 223 174
30 % 63 223 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.