Sequence Similarity Clusters for the Entities in PDB 1C1C

Entity #1 | Chains: A
HIV-1 REVERSE TRANSCRIPTASE (A-CHAIN) protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 61 470
95 % 65 231 107
90 % 65 231 112
70 % 65 231 129
50 % 66 232 157
40 % 66 232 171
30 % 66 232 189
Entity #2 | Chains: B
HIV-1 REVERSE TRANSCRIPTASE (B-CHAIN) protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 57 602
95 % 62 225 116
90 % 62 225 119
70 % 62 225 136
50 % 63 226 165
40 % 63 226 180
30 % 63 226 198

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.