Sequence Similarity Clusters for the Entities in PDB 1C16

Entity #1 | Chains: A,C,E,G
MHC-LIKE PROTEIN T22 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 12332
95 % 1 2 11940
90 % 2 3 6845
70 % 2 3 6677
50 % 688 697 6
40 % 737 748 10
30 % 854 868 15
Entity #2 | Chains: B,D,F,H
PROTEIN (BETA-2-MICROGLOBULIN) protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 586 600 2
95 % 629 644 3
90 % 638 653 4
70 % 869 885 4
50 % 890 907 3
40 % 890 907 9
30 % 890 907 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.