Sequence Similarity Clusters for the Entities in PDB 1C16

Entity #1 | Chains: A,C,E,G
MHC-LIKE PROTEIN T22 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 11939
95 % 1 2 11557
90 % 2 3 6591
70 % 2 3 6426
50 % 665 673 7
40 % 713 723 10
30 % 827 840 15
Entity #2 | Chains: B,D,F,H
PROTEIN (BETA-2-MICROGLOBULIN) protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 565 579 2
95 % 607 622 3
90 % 616 631 4
70 % 845 861 5
50 % 866 883 5
40 % 866 883 9
30 % 866 883 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.