Sequence Similarity Clusters for the Entities in PDB 1C12

Entity #1 | Chains: A
PROTEIN (ANTIBODY FRAGMENT FAB) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59364
95 % 18 28 1155 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.8
PDBFlex
90 % 19 30 1104
70 % 1250 2264 1
50 % 2552 4587 1
40 % 2552 4587 1
30 % 2923 5392 1
Entity #2 | Chains: B
PROTEIN (ANTIBODY FRAGMENT FAB) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58701
95 % 1 1 41246
90 % 1 1 39353
70 % 1239 2222 2
50 % 2553 4587 1
40 % 2553 4587 1
30 % 2924 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.