Sequence Similarity Clusters for the Entities in PDB 1C12

Entity #1 | Chains: A
PROTEIN (ANTIBODY FRAGMENT FAB) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61503
95 % 18 28 1201 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.8
PDBFlex
90 % 19 30 1147
70 % 1329 2392 1
50 % 2712 4843 1
40 % 2712 4843 1
30 % 3109 5705 1
Entity #2 | Chains: B
PROTEIN (ANTIBODY FRAGMENT FAB) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60798
95 % 1 1 42724
90 % 1 1 40706
70 % 1314 2342 2
50 % 2713 4843 1
40 % 2713 4843 1
30 % 3110 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures