Sequence Similarity Clusters for the Entities in PDB 1C12

Entity #1 | Chains: A
PROTEIN (ANTIBODY FRAGMENT FAB) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60220
95 % 18 28 1172 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.8
PDBFlex
90 % 19 30 1120
70 % 1261 2287 1
50 % 2574 4633 1
40 % 2574 4633 1
30 % 2955 5461 1
Entity #2 | Chains: B
PROTEIN (ANTIBODY FRAGMENT FAB) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59545
95 % 1 1 41854
90 % 1 1 39916
70 % 1250 2244 2
50 % 2575 4633 1
40 % 2575 4633 1
30 % 2956 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.