Sequence Similarity Clusters for the Entities in PDB 1C0U

Entity #1 | Chains: A
HIV-1 REVERSE TRANSCRIPTASE (A-CHAIN) protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 61 455
95 % 66 230 106
90 % 66 230 110
70 % 66 230 125
50 % 67 231 153
40 % 67 231 169
30 % 67 231 185
Entity #2 | Chains: B
HIV-1 REVERSE TRANSCRIPTASE (B-CHAIN) protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 57 571
95 % 63 224 114
90 % 63 224 120
70 % 63 224 137
50 % 64 225 164
40 % 64 225 178
30 % 64 225 194

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.