Sequence Similarity Clusters for the Entities in PDB 1C0M

Entity #1 | Chains: A,B,C,D
PROTEIN (INTEGRASE) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12412
95 % 2 3 9002 Flexibility: Medium
Max RMSD: 14.4, Avg RMSD: 8.5
PDBFlex
90 % 2 3 8921
70 % 2 3 8536
50 % 2 3 7732
40 % 2 3 7113
30 % 2 3 6275

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.