Sequence Similarity Clusters for the Entities in PDB 1C0F

Entity #1 | Chains: S
GELSOLIN SEGMENT 1 protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 11350
95 % 20 29 1896 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 20 29 1936
70 % 20 29 1955
50 % 20 29 1979
40 % 20 29 1958
30 % 20 29 1862
Entity #2 | Chains: A
ACTIN protein, length: 368 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54112
95 % 72 205 9 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 0.9
PDBFlex
90 % 74 211 9
70 % 77 216 11
50 % 77 223 15
40 % 78 242 24
30 % 79 262 38

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures