Sequence Similarity Clusters for the Entities in PDB 1C0F

Entity #1 | Chains: S
GELSOLIN SEGMENT 1 protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 7566
95 % 20 29 1853 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 20 29 1894
70 % 20 29 1927
50 % 20 29 1944
40 % 20 29 1950
30 % 20 29 1879
Entity #2 | Chains: A
ACTIN protein, length: 368 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55034
95 % 72 197 8
90 % 74 202 10
70 % 77 207 11
50 % 77 214 15
40 % 78 233 23
30 % 79 253 36

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures