Sequence Similarity Clusters for the Entities in PDB 1C0A

Entity #1 | Chains: B
ASPARTYL TRNA rna, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
ASPARTYL TRNA SYNTHETASE protein, length: 585 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 12814
95 % 1 3 12215 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.9
PDBFlex
90 % 1 3 12036
70 % 1 3 11369
50 % 3 11 2857
40 % 3 12 2381
30 % 3 12 2236

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures