Sequence Similarity Clusters for the Entities in PDB 1C0A

Entity #1 | Chains: B
ASPARTYL TRNA rna, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
ASPARTYL TRNA SYNTHETASE protein, length: 585 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 11118
95 % 1 3 11079 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.9
PDBFlex
90 % 1 3 10930
70 % 1 3 10369
50 % 3 11 2717
40 % 3 12 2232
30 % 3 12 2132

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.