Sequence Similarity Clusters for the Entities in PDB 1BZD

Entity #1 | Chains: A,B
PROTEIN (TRANSTHYRETIN) protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 129 172 46
95 % 207 291 10 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 207 291 11
70 % 208 297 14
50 % 212 301 20
40 % 212 301 32
30 % 217 313 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures