Sequence Similarity Clusters for the Entities in PDB 1BZD

Entity #1 | Chains: A,B
PROTEIN (TRANSTHYRETIN) protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 154 225 24
95 % 210 298 10 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 210 298 12
70 % 211 304 17
50 % 220 315 26
40 % 220 315 38
30 % 225 327 48

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures