Sequence Similarity Clusters for the Entities in PDB 1BZD

Entity #1 | Chains: A,B
PROTEIN (TRANSTHYRETIN) protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 153 224 23
95 % 209 297 9 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 209 297 11
70 % 210 303 15
50 % 219 314 19
40 % 219 314 33
30 % 224 326 45

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures