Sequence Similarity Clusters for the Entities in PDB 1BYU

Entity #1 | Chains: A,B
PROTEIN (GTP-BINDING PROTEIN RAN) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39451
95 % 23 74 304 Flexibility: Medium
Max RMSD: 15.6, Avg RMSD: 4.9
PDBFlex
90 % 23 77 305
70 % 24 80 333
50 % 24 80 396
40 % 25 81 415
30 % 343 763 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.