Sequence Similarity Clusters for the Entities in PDB 1BYD

Entity #1 | Chains: A
BETA-AMYLASE protein, length: 495 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 12 5259
95 % 14 20 2406 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 14 20 2481
70 % 15 23 2164
50 % 21 30 1702
40 % 21 30 1694
30 % 21 30 1637

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures