Sequence Similarity Clusters for the Entities in PDB 1BYA

Entity #1 | Chains: A
BETA-AMYLASE protein, length: 495 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 12 5440
95 % 18 20 2492 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 18 20 2561
70 % 19 23 2245
50 % 25 30 1773
40 % 25 30 1761
30 % 25 30 1695

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures