Sequence Similarity Clusters for the Entities in PDB 1BXX

Entity #1 | Chains: A
PROTEIN (AP50) protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 37127
95 % 5 6 11907 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 5 6 11738
70 % 7 8 8415
50 % 7 8 7656
40 % 9 10 4897
30 % 9 10 4456
Entity #2 | Chains: P
PROTEIN (TGN38 PEPTIDE) protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.