Sequence Similarity Clusters for the Entities in PDB 1BXR

Entity #1 | Chains: A,C,E,G
CARBAMOYL-PHOSPHATE SYNTHASE protein, length: 1073 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 1426
95 % 10 10 1259 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 10 10 1285
70 % 10 10 1307
50 % 10 10 1350
40 % 10 10 1366
30 % 10 10 1346
Entity #2 | Chains: B,D,F,H
CARBAMOYL-PHOSPHATE SYNTHASE protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 4493
95 % 10 10 1277 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 10 10 1302
70 % 10 10 1320
50 % 10 10 1367
40 % 10 10 1389
30 % 10 10 1360

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.