Sequence Similarity Clusters for the Entities in PDB 1BXR

Entity #1 | Chains: A,C,E,G
CARBAMOYL-PHOSPHATE SYNTHASE protein, length: 1073 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 1554
95 % 10 10 1353 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.3
PDBFlex
90 % 10 10 1375
70 % 10 10 1390
50 % 10 10 1441
40 % 10 10 1448
30 % 10 10 1433
Entity #2 | Chains: B,D,F,H
CARBAMOYL-PHOSPHATE SYNTHASE protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 4933
95 % 10 10 1374 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 10 10 1395
70 % 10 10 1404
50 % 10 10 1459
40 % 10 10 1464
30 % 10 10 1446

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures