Sequence Similarity Clusters for the Entities in PDB 1BXN

Entity #1 | Chains: A,C,E,G
PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN) protein, length: 485 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 25231
95 % 1 1 22486 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 21775
70 % 11 12 1130
50 % 52 56 134
40 % 60 65 130
30 % 89 95 107
Entity #2 | Chains: I,J,K,L
PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN) protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 25232
95 % 1 1 22487 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 21776
70 % 1 1 19854
50 % 10 11 1182
40 % 10 11 1186
30 % 10 11 1167

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures