Sequence Similarity Clusters for the Entities in PDB 1BXN

Entity #1 | Chains: A,C,E,G
PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN) protein, length: 485 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17880
95 % 1 1 16327 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 16025
70 % 8 9 1304
50 % 49 52 122
40 % 57 61 120
30 % 86 91 96
Entity #2 | Chains: I,J,K,L
PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN) protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23868
95 % 1 1 20452 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 19877
70 % 1 1 18308
50 % 8 8 1724
40 % 8 8 1737
30 % 8 8 1699

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures