Sequence Similarity Clusters for the Entities in PDB 1BXN

Entity #1 | Chains: A,C,E,G
PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN) protein, length: 485 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16760
95 % 1 1 15381 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 15093
70 % 6 7 2160
50 % 45 48 172
40 % 53 57 144
30 % 82 87 114
Entity #2 | Chains: I,J,K,L
PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN) protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22401
95 % 1 1 19251 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 18730
70 % 1 1 17315
50 % 6 6 3191
40 % 6 6 3105
30 % 6 6 2915

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.