Sequence Similarity Clusters for the Entities in PDB 1BXN

Entity #1 | Chains: A,C,E,G
PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN) protein, length: 485 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24690
95 % 1 1 22012 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 21315
70 % 11 12 1099
50 % 52 56 130
40 % 60 65 126
30 % 89 95 105
Entity #2 | Chains: I,J,K,L
PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN) protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24691
95 % 1 1 22013 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 21316
70 % 1 1 19456
50 % 10 11 1154
40 % 10 11 1155
30 % 10 11 1139

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures