Sequence Similarity Clusters for the Entities in PDB 1BXN

Entity #1 | Chains: A,C,E,G
PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN) protein, length: 485 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17479
95 % 1 1 15996 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 15707
70 % 6 7 2231
50 % 46 49 131
40 % 54 58 124
30 % 83 88 93
Entity #2 | Chains: I,J,K,L
PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN) protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23337
95 % 1 1 20042 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 19493
70 % 1 1 17970
50 % 6 6 3306
40 % 6 6 3207
30 % 6 6 3013

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures