Sequence Similarity Clusters for the Entities in PDB 1BXI

Entity #1 | Chains: A
PROTEIN (COLICIN E9 IMMUNITY PROTEIN) protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 70913
95 % 13 18 2712 Flexibility: No
Max RMSD: 1.8, Avg RMSD: 0.5
PDBFlex
90 % 13 20 2262
70 % 15 23 1995
50 % 25 39 972
40 % 25 39 1000
30 % 25 39 975
Entity #2 | Chains: B
PROTEIN (COLICIN E9) protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 3456
95 % 15 19 1805 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 15 19 1843
70 % 23 35 959
50 % 26 38 851
40 % 26 38 882
30 % 26 38 867

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.