Sequence Similarity Clusters for the Entities in PDB 1BXI

Entity #1 | Chains: A
PROTEIN (COLICIN E9 IMMUNITY PROTEIN) protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 73067
95 % 13 18 2822 Flexibility: No
Max RMSD: 1.8, Avg RMSD: 0.5
PDBFlex
90 % 13 20 2365
70 % 15 23 2086
50 % 25 39 996
40 % 25 39 1022
30 % 25 39 1011
Entity #2 | Chains: B
PROTEIN (COLICIN E9) protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 3596
95 % 15 19 1904 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 15 19 1948
70 % 23 35 994
50 % 26 38 873
40 % 26 38 905
30 % 26 38 891

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures