Sequence Similarity Clusters for the Entities in PDB 1BXI

Entity #1 | Chains: A
PROTEIN (COLICIN E9 IMMUNITY PROTEIN) protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 72258
95 % 13 18 2781 Flexibility: No
Max RMSD: 1.8, Avg RMSD: 0.5
PDBFlex
90 % 13 20 2326
70 % 15 23 2054
50 % 25 39 991
40 % 25 39 1016
30 % 25 39 1000
Entity #2 | Chains: B
PROTEIN (COLICIN E9) protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 3547
95 % 15 19 1856 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 15 19 1897
70 % 23 35 982
50 % 26 38 865
40 % 26 38 898
30 % 26 38 882

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures