Sequence Similarity Clusters for the Entities in PDB 1BX2

Entity #1 | Chains: A,D
PROTEIN (HLA-DR2) protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 53 71 231
95 % 59 78 292 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 69 94 231
70 % 69 94 266
50 % 100 146 173
40 % 100 146 188
30 % 205 304 93
Entity #2 | Chains: B,E
PROTEIN (HLA-DR2) protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 14831
95 % 1 3 13957 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 57 73 341
70 % 95 137 163
50 % 100 146 172
40 % 100 146 187
30 % 206 304 93
Entity #3 | Chains: C,F
PROTEIN (HLA-DR2) protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.