Sequence Similarity Clusters for the Entities in PDB 1BX2

Entity #1 | Chains: A,D
PROTEIN (HLA-DR2) protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 56 74 231
95 % 62 81 295 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 72 97 236
70 % 72 97 269
50 % 103 149 179
40 % 103 149 196
30 % 211 310 99
Entity #2 | Chains: B,E
PROTEIN (HLA-DR2) protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15428
95 % 1 3 14491 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 60 76 339
70 % 98 140 163
50 % 103 149 178
40 % 103 149 195
30 % 212 310 99
Entity #3 | Chains: C,F
PROTEIN (HLA-DR2) protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.