Sequence Similarity Clusters for the Entities in PDB 1BWV

Entity #1 | Chains: A,C,E,G
PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE) protein, length: 493 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 4571
95 % 4 5 4319 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 4 5 4348
70 % 4 7 2191
50 % 27 48 175
40 % 30 57 148
30 % 44 87 116
Entity #2 | Chains: S,U,W,Y
PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE) protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22990
95 % 1 2 6034 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 4 5 4500
70 % 4 5 4426
50 % 4 6 3261
40 % 4 6 3169
30 % 4 6 2980

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.