Sequence Similarity Clusters for the Entities in PDB 1BWQ

Entity #1 | Chains: A
PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59993
95 % 8 9 7883 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 8 9 7831
70 % 8 9 7613
50 % 9 11 3126
40 % 9 11 3050
30 % 9 11 2860

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1ES9 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT 9913 3.1.1.47 | Details
2 1WAB 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE WITH ACETATE BOUND 9913 3.1.1.47 | Details
3 3DT8 1 A Brain Platelet-activating factor acetylhydrolase IB subunit alpha 9913 3.1.1.47 | Details
4 3DT9 1 A Brain Platelet-activating factor acetylhydrolase IB subunit alpha 9913 3.1.1.47 | Details
5 3DT6 1 A Brain Platelet-activating factor acetylhydrolase IB subunit alpha 9913 3.1.1.47 | Details
6 1BWP 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 9913 3.1.1.47 | Details
7 1FXW 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT 9913 3.1.1.47 | Details
8 1BWQ 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 9913 3.1.1.47 | Details
9 1BWR 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 9913 3.1.1.47 | Details