Sequence Similarity Clusters for the Entities in PDB 1BWQ

Entity #1 | Chains: A
PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63218
95 % 8 9 8364 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 8 9 8283
70 % 8 9 8016
50 % 9 11 3409
40 % 9 11 3280
30 % 9 11 3019

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures