Sequence Similarity Clusters for the Entities in PDB 1BWQ

Entity #1 | Chains: A
PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61157
95 % 8 9 8013 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 8 9 7943
70 % 8 9 7689
50 % 9 11 3278
40 % 9 11 3165
30 % 9 11 2917

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures