Sequence Similarity Clusters for the Entities in PDB 1BVZ

Entity #1 | Chains: A,B
PROTEIN (ALPHA-AMYLASE II) protein, length: 585 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 14 1854
95 % 7 16 1825 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 7 16 1865
70 % 7 16 1881
50 % 7 16 1917
40 % 9 23 1302
30 % 20 34 1023

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures