Sequence Similarity Clusters for the Entities in PDB 1BVS

Entity #1 | Chains: A,B,C,D,E,F,G,H
PROTEIN (HOLLIDAY JUNCTION DNA HELICASE RUVA) protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 9227
95 % 1 1 9417 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 1 1 9308
70 % 5 5 3341
50 % 5 5 3252
40 % 5 5 3161
30 % 8 10 2041

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures