Sequence Similarity Clusters for the Entities in PDB 1BVP

Entity #1 | Chains: 1,2,3,4,5,6
BLUETONGUE VIRUS COAT PROTEIN VP7 protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 13858
95 % 1 2 3491 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 1 2 3557
70 % 1 2 3504
50 % 1 2 3418
40 % 1 2 3276
30 % 1 2 3034

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures