Sequence Similarity Clusters for the Entities in PDB 1BVO

Entity #1 | Chains: D
DNA DUPLEX dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: E
DNA DUPLEX dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
TRANSCRIPTION FACTOR GAMBIF1 protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62797
95 % 1 1 43757
90 % 1 1 41548
70 % 1 1 36541
50 % 1 1 31126
40 % 1 1 27459
30 % 1 1 23294

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.