Sequence Similarity Clusters for the Entities in PDB 1BVN

Entity #1 | Chains: P
PROTEIN (ALPHA-AMYLASE) protein, length: 496 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52357
95 % 15 17 2678
90 % 15 17 2728
70 % 73 78 585
50 % 75 82 599
40 % 83 91 575
30 % 83 91 571
Entity #2 | Chains: T
PROTEIN (TENDAMISTAT) protein, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 14369
95 % 3 6 13604
90 % 3 6 13388
70 % 3 6 12593
50 % 3 6 11233
40 % 3 6 10183
30 % 3 6 8878

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures