Sequence Similarity Clusters for the Entities in PDB 1BVN

Entity #1 | Chains: P
PROTEIN (ALPHA-AMYLASE) protein, length: 496 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51622
95 % 15 17 2627 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 15 17 2674
70 % 72 77 586
50 % 74 81 596
40 % 82 90 569
30 % 82 90 570
Entity #2 | Chains: T
PROTEIN (TENDAMISTAT) protein, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 14151
95 % 3 6 13416
90 % 3 6 13197
70 % 3 6 12411
50 % 3 6 11069
40 % 3 6 10039
30 % 3 6 8748

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.